Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
THII_1303CDP-6-deoxy-delta-3,4-glucoseen reductase. (494 aa)    
Predicted Functional Partners:
THII_1524
NADP oxidoreductase.
  
 
 0.952
THII_0619
Protein involved in sulfur oxidation DsrL.
 
 
 0.938
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.925
THII_3690
NADPH-dependent glutamate synthase beta chain - like protein.
   
 0.919
THII_1697
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.918
THII_0778
Pyridine nucleotide-disulfide oxidoreductase family.
  
 0.917
THII_1696
CDP-glucose 4,6-dehydratase.
  
 
 0.910
THII_2208
Polyketide synthase.
  
 0.905
THII_3058
Glutamate synthase.
   
 0.887
THII_1695
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.871
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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