Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
pepALeucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (520 aa)    
Predicted Functional Partners:
THII_3486
Peptidase M1 family protein.
  
 0.959
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.933
THII_3773
Aminoacyl-histidine dipeptidase.
   
 
 0.917
THII_1290
Glutamate--cysteine ligase GshA.
  
 
  0.900
THII_3762
Aspartate aminotransferase.
   
  0.830
THII_1307
DNA polymerase III chi subunit, HolC.
  
  
 0.773
THII_1235
Glycosyl hydrolase.
    
 0.699
rsmG
16S rRNA methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
      0.659
THII_1305
Permease.
       0.602
THII_0251
Peptidase M24, catalytic core; Belongs to the peptidase M24B family.
 
 
 0.560
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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