STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1327Chain length determinant protein. (702 aa)    
Predicted Functional Partners:
THII_1326
Capsular polysaccharide export protein.
 
 
 0.996
THII_0799
Protein involved in polysaccharide export.
 
 
 0.979
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.976
THII_1524
NADP oxidoreductase.
     
 0.857
THII_0822
Bacterial sugar transferase.
 
  
 0.798
THII_2476
Bacterial sugar transferase.
 
  
 0.788
THII_3142
O-antigen polymerase.
 
  
 0.784
THII_2475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.778
THII_3120
Sugar transferase.
 
  
 0.753
THII_3119
Polysaccharide biosynthesis protein CapD.
 
  
 0.740
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.