STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1364Sensor diguanylate cyclase/phosphodiesterase, GAF and PAS domain-containing. (1140 aa)    
Predicted Functional Partners:
THII_3834
Sensory transduction histidine kinase.
 
 0.896
THII_1913
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.866
THII_0636
Signal transduction histidine kinase.
  
 
0.865
THII_2963
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.855
THII_2528
Signal transduction histidine kinase.
  
 
 0.844
THII_1954
Signal transduction histidine kinase.
  
 
 0.840
THII_2168
Signal transduction histidine kinase.
 
 
 0.835
THII_1365
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.812
THII_2053
Diguanylate cyclase with PAS/PAC and GAF sensors.
 
 
0.807
THII_1036
Signal transduction histidine kinase.
  
 
 0.789
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.