Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1390Peptide ABC transporter substrate-binding protein. (603 aa)    
Predicted Functional Partners:
THII_1392
ABC transporter permease.
  
 0.978
THII_1393
Peptide ABC transporter permease.
 
  
 0.962
THII_0682
Glutathione ABC transporter permease.
  
 
 0.894
THII_3910
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.826
THII_1391
Hypothetical protein.
       0.775
THII_1389
Hypothetical protein.
       0.693
THII_0681
Binding-protein-dependent transporters inner membrane component.
  
  
 0.500
THII_0384
ABC-type Mn2+/Zn2+ transport system, permease component.
     
 0.497
THII_2692
Peptide ABC transporter substrate-binding protein.
  
 
 0.483
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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