STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1452Bacteriocin biosynthesis cyclodehydratase domain-containing protein. (749 aa)    
Predicted Functional Partners:
THII_1453
TIM-barrel fold metal-dependent hydrolase.
 
     0.765
THII_2861
Hypothetical protein.
  
     0.666
THII_1451
Hypothetical protein.
       0.658
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
  
     0.640
THII_2783
tubC protein.
  
     0.634
THII_0011
Hypothetical protein.
  
     0.628
THII_0225
Hypothetical protein.
  
     0.616
THII_0012
Polyketide synthase family protein.
  
    0.607
THII_1655
Nitroreductase.
  
  
 0.605
THII_2374
Nitroreductase.
  
  
 0.605
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.