STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1461Putative amidophosphoribosyltransferase. (238 aa)    
Predicted Functional Partners:
THII_0199
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.882
THII_2428
DNA processing chain A.
 
 
 0.863
THII_1158
Mg chelatase family protein.
 
  
 0.839
THII_0928
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.813
THII_1320
Hypothetical protein; Belongs to the UPF0102 family.
 
    0.758
THII_2294
PAS domain S-box.
  
  
 0.700
THII_0031
Prephenate dehydrogenase.
   
  
 0.673
THII_1913
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
  
  
 0.562
THII_1462
Hypothetical protein.
 
     0.552
THII_0220
Transporter.
  
 
 0.550
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.