Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_1461Putative amidophosphoribosyltransferase. (238 aa)    
Predicted Functional Partners:
THII_0199
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.911
THII_1158
Mg chelatase family protein.
 
  
 0.888
THII_2428
DNA processing chain A.
 
 
 0.871
THII_1320
Hypothetical protein; Belongs to the UPF0102 family.
 
    0.749
THII_2294
PAS domain S-box.
  
    0.690
THII_0031
Prephenate dehydrogenase.
   
    0.678
THII_0928
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.625
THII_0596
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.607
THII_0220
Transporter.
  
 
 0.574
THII_0213
ABC transporter ATP-binding protein.
   
    0.557
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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