THII_1467 protein (Thioploca ingrica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

THII_1467

Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family. (249 aa)

Predicted Functional Partners:

THII_0202

0.915

surE

0.914

THII_3051

0.907

THII_0201

0.903

THII_0039

0.900

THII_0194

0.900

THII_0195

0.900

mtnA

0.900

THII_2816

0.900

THII_2817

0.900

Your Current Organism:

Thioploca ingrica

NCBI taxonomy Id: 40754
Other names: T. ingrica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
THII_0039	THII_0202	THII_0039	THII_0202	Haloacid dehalogenase superfamily protein.	Hypoxanthine-guanine phosphoribosyltransferase.	0.900
THII_0039	THII_1467	THII_0039	THII_1467	Haloacid dehalogenase superfamily protein.	Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.	0.900
THII_0039	surE	THII_0039	THII_1715	Haloacid dehalogenase superfamily protein.	Survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.	0.910
THII_0194	THII_0195	THII_0194	THII_0195	Xanthine dehydrogenase.	(2Fe-2S)-binding protein.	0.999
THII_0194	THII_0201	THII_0194	THII_0201	Xanthine dehydrogenase.	5''-deoxy-5''-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.	0.527
THII_0194	THII_0202	THII_0194	THII_0202	Xanthine dehydrogenase.	Hypoxanthine-guanine phosphoribosyltransferase.	0.900
THII_0194	THII_1467	THII_0194	THII_1467	Xanthine dehydrogenase.	Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.	0.900
THII_0195	THII_0194	THII_0195	THII_0194	(2Fe-2S)-binding protein.	Xanthine dehydrogenase.	0.999
THII_0195	THII_0202	THII_0195	THII_0202	(2Fe-2S)-binding protein.	Hypoxanthine-guanine phosphoribosyltransferase.	0.900
THII_0195	THII_1467	THII_0195	THII_1467	(2Fe-2S)-binding protein.	Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.	0.900
THII_0201	THII_0194	THII_0201	THII_0194	5''-deoxy-5''-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.	Xanthine dehydrogenase.	0.527
THII_0201	THII_0202	THII_0201	THII_0202	5''-deoxy-5''-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.	Hypoxanthine-guanine phosphoribosyltransferase.	0.932
THII_0201	THII_1467	THII_0201	THII_1467	5''-deoxy-5''-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.	Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.	0.903
THII_0201	mtnA	THII_0201	THII_1317	5''-deoxy-5''-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.	S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).	0.975
THII_0202	THII_0039	THII_0202	THII_0039	Hypoxanthine-guanine phosphoribosyltransferase.	Haloacid dehalogenase superfamily protein.	0.900
THII_0202	THII_0194	THII_0202	THII_0194	Hypoxanthine-guanine phosphoribosyltransferase.	Xanthine dehydrogenase.	0.900
THII_0202	THII_0195	THII_0202	THII_0195	Hypoxanthine-guanine phosphoribosyltransferase.	(2Fe-2S)-binding protein.	0.900
THII_0202	THII_0201	THII_0202	THII_0201	Hypoxanthine-guanine phosphoribosyltransferase.	5''-deoxy-5''-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.	0.932
THII_0202	THII_1467	THII_0202	THII_1467	Hypoxanthine-guanine phosphoribosyltransferase.	Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.	0.915
THII_0202	surE	THII_0202	THII_1715	Hypoxanthine-guanine phosphoribosyltransferase.	Survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.	0.922