STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1481TetR family transcriptional regulator. (204 aa)    
Predicted Functional Partners:
THII_1482
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.811
THII_1483
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.787
THII_2053
Diguanylate cyclase with PAS/PAC and GAF sensors.
  
 
 0.526
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.477
THII_2208
Polyketide synthase.
     
 0.475
THII_1480
ErfK/YbiS/YcfS/YnhG family protein.
       0.456
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.452
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
     
 0.441
THII_1484
Hypothetical protein.
       0.436
THII_2168
Signal transduction histidine kinase.
   
 
 0.418
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.