STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1496NB-ARC domain-containing protein. (556 aa)    
Predicted Functional Partners:
THII_3140
WD40 repeat-containing protein.
 
      0.749
THII_3139
Serine/threonine protein kinase with WD40 repeats.
 
      0.736
THII_0511
Na-Ca exchanger/integrin-beta4.
  
     0.734
THII_3283
PDK repeat-containing protein.
  
     0.734
THII_0212
Serine/threonine protein kinase with WD40 repeats.
 
      0.726
THII_2524
Sulfotransferase family protein.
  
     0.726
THII_0260
Conserved repeat protein.
  
     0.714
THII_3045
Hypothetical protein.
  
     0.714
THII_2126
Hypothetical protein.
  
     0.697
THII_2968
PAS domain S-box.
  
     0.677
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.