STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1500Cytochrome c peroxidase. (345 aa)    
Predicted Functional Partners:
tolB
Tol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.570
THII_0097
NHL repeat containing protein.
  
 
 0.529
THII_2877
Cytochrome d1 heme subunit.
  
 
 0.473
THII_1752
NHL repeat-containing protein.
  
 
 0.462
THII_0115
Hypothetical protein.
  
 
 0.460
THII_0490
Hypothetical protein.
  
 
 0.460
THII_2897
Hypothetical protein.
  
 
 0.460
THII_1756
Outer membrane protein W.
   
  
 0.458
THII_3192
Phosphoketolase.
   
    0.434
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.