Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
THII_1542Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (535 aa)    
Predicted Functional Partners:
THII_2951
Hypothetical protein.
  
     0.550
THII_1541
Diguanylate cyclase.
       0.511
THII_3545
Hypothetical protein.
  
     0.480
THII_0606
Receptor protein kinase-like protein.
  
     0.467
THII_1540
PAS domain-containing protein.
  
  
 0.451
THII_1543
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.450
THII_3417
PAS/PAC sensor hybrid histidine kinase.
  
    0.412
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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