STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1574TIR domain-containing protein. (2013 aa)    
Predicted Functional Partners:
THII_0782
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.671
THII_0964
TPR repeat containing protein.
 
 0.644
THII_2208
Polyketide synthase.
 
 
 0.643
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 
 0.636
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
    
  0.576
THII_3046
ADP-ribosylation/crystallin J1.
   
 0.563
THII_1006
Hypothetical protein.
  
 0.559
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.539
THII_2970
Hypothetical protein.
 
    0.537
THII_2297
Hypothetical protein.
 
     0.499
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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