STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1601Hypothetical protein. (247 aa)    
Predicted Functional Partners:
THII_0651
TonB family protein.
  
     0.763
THII_0849
Hypothetical protein.
  
     0.715
nudJ
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. NudJ subfamily.
  
     0.713
prmA
50S ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.708
THII_1284
Hypothetical protein.
  
     0.693
THII_0092
Hypothetical protein.
  
     0.658
THII_1033
Hypothetical protein.
  
     0.652
THII_1986
Chemotaxis signal transduction protein.
  
     0.604
THII_1600
Decarboxylase; Belongs to the LOG family.
       0.584
THII_1429
MotA/TolQ/ExbB proton channel family protein.
  
     0.583
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.