STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1649NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (334 aa)    
Predicted Functional Partners:
THII_1133
UTP-glucose-1-phosphate uridylyltransferase.
  
 0.937
THII_2141
UDP-galactopyranose mutase.
 
  
 0.926
THII_1754
Nucleotide sugar dehydrogenase.
  
 
 0.918
THII_3662
Nucleoside-diphosphate-sugar epimerase.
  
 0.906
THII_1650
Hypothetical protein.
       0.757
THII_3482
Histidinol-phosphatase.
    
 0.706
THII_3057
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.523
THII_1651
Hypothetical protein.
       0.515
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
 
   
 0.468
THII_1698
NAD-dependent epimerase/dehydratase.
 
 
 0.436
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.