STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1660Hypothetical protein. (411 aa)    
Predicted Functional Partners:
THII_1661
Hypothetical protein.
 
     0.879
THII_1662
ABC transporter permease.
 
     0.868
THII_1663
ABC-type multidrug transport system, ATPase component.
 
     0.843
THII_1969
ABC-type multidrug transport system, ATPase component.
 
     0.567
THII_1968
ABC transporter permease.
 
     0.554
THII_2379
Hypothetical protein.
  
     0.497
THII_1194
Hypothetical protein.
  
     0.493
THII_2387
Filamentous hemagglutinin family N-terminal domain.
  
     0.476
lptE
Lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
  
     0.462
THII_3067
Histidine kinase.
  
     0.436
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.