STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1663ABC-type multidrug transport system, ATPase component. (319 aa)    
Predicted Functional Partners:
THII_1662
ABC transporter permease.
 
 
 0.957
THII_2736
Mannose-1-phosphate guanyltransferase.
 
  
 0.937
THII_1661
Hypothetical protein.
 
  
 0.914
THII_0808
ABC transporter ATP-binding protein.
 
     
0.897
THII_1968
ABC transporter permease.
 
 
 0.889
THII_1660
Hypothetical protein.
 
     0.843
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
    
0.788
THII_1967
Hypothetical protein.
 
  
 0.699
THII_2893
ABC-2 type transporter.
 
 
 0.613
THII_2888
Copper ABC transporter substrate-binding protein.
 
 
 0.508
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.