Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1691Flavoprotein subunit of flavocytochrome c sulfide dehydrogenase. (433 aa)    
Predicted Functional Partners:
THII_1692
Flavocytochrome c subunit fccA.
 
 
 0.999
THII_0779
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.949
THII_0619
Protein involved in sulfur oxidation DsrL.
 
 
 0.923
THII_0620
Electron transport protein DsrJ.
  
  
  0.914
THII_0618
Electron transport protein DsrK.
  
 
 0.908
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.908
THII_0612
Sulfite reductase, dissimilatory-type subunit beta.
    
 0.902
THII_0611
Sulfite reductase, dissimilatory-type subunit alpha.
    
  0.901
THII_0617
Electron transport protein DsrM.
     
  0.900
THII_0621
Sulfur oxidation protein DsrO.
     
  0.900
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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