STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1702Hypothetical protein. (350 aa)    
Predicted Functional Partners:
THII_1701
Glycosyl transferase family protein.
 
     0.760
THII_1695
Glucose-1-phosphate cytidylyltransferase.
 
    0.730
THII_1703
Polysaccharide biosynthesis protein.
  
    0.695
THII_1704
Sulfotransferase.
       0.693
THII_1699
NAD-dependent epimerase/dehydratase.
 
  
 0.667
THII_1700
Polysaccharide biosynthesis protein.
 
    0.658
THII_1698
NAD-dependent epimerase/dehydratase.
 
     0.657
THII_1696
CDP-glucose 4,6-dehydratase.
 
     0.590
THII_1697
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.499
THII_1705
Hypothetical protein.
       0.490
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.