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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1709Glycosyl transferase group 1. (397 aa)    
Predicted Functional Partners:
THII_1714
Glycosyl transferase group 1.
    0.985
THII_1710
Putative acetyltransferase.
    0.964
THII_1712
Glycosyl transferase family protein.
  
 0.953
THII_1711
Methyltransferase family protein.
       0.773
THII_1713
Radical SAM protein.
       0.714
glgB
1,4-alpha-glucan-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.546
THII_1707
Family 2 glycosyl transferase.
 
  
 0.527
THII_3123
Group 1 glycosyl transferase.
    0.513
THII_2208
Polyketide synthase.
  
 
 0.502
THII_1708
Glycosyl transferase.
 
    
0.468
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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