Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
THII_1720Thioredoxin reductase. (321 aa)    
Predicted Functional Partners:
THII_0180
Thioredoxin; Belongs to the thioredoxin family.
 
 0.996
THII_3303
Antioxidant, AhpC/Tsa family protein.
  
 
 0.920
THII_0065
Thioredoxin.
 
 0.856
THII_1472
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.829
THII_1145
Hypothetical protein.
  
 
 0.669
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 0.657
THII_0075
Disulfide interchange protein DsbE.
  
 
 0.653
THII_1895
NHL repeat containing protein.
  
 
 0.653
THII_0867
Thiol-disulfide isomerase.
  
 
 0.633
THII_2312
Peroxiredoxin.
 
  
 0.602
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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