STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1786Fibro-slime family protein. (405 aa)    
Predicted Functional Partners:
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.528
THII_2208
Polyketide synthase.
 
   
 0.511
THII_3064
Cartilage oligomeric matrix protein.
  
   0.486
THII_3290
Hypothetical protein.
  
     0.463
THII_3115
Hypothetical protein.
  
   0.452
THII_3090
Receptor protein kinase-like protein.
  
   0.437
THII_0199
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.428
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
 
   
 0.427
THII_2498
Hypothetical protein.
  
   0.402
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.