STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1789Ferrichrome transport ATP-binding protein FhuC. (262 aa)    
Predicted Functional Partners:
THII_1790
Fe(3+)-siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
THII_3532
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.990
THII_2738
ABC transporter.
  
   0.777
THII_3486
Peptidase M1 family protein.
  
  
 0.539
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
  
  
 0.527
THII_0485
Putative macrolide efflux ABC transporter, ATP-binding protein.
  
  
0.487
THII_0487
ABC transporter.
  
  
0.486
THII_3809
Cobyrinic acid a,c-diamide synthase.
   
 0.485
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
  
0.477
THII_2783
tubC protein.
  
  
 0.418
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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