Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1791Hypothetical protein. (1936 aa)    
Predicted Functional Partners:
THII_0260
Conserved repeat protein.
  
     0.668
THII_0511
Na-Ca exchanger/integrin-beta4.
  
     0.613
THII_2968
PAS domain S-box.
  
     0.610
THII_2357
Hemagglutinin/hemolysin-like protein.
  
     0.604
THII_0505
Na-Ca exchanger/integrin-beta4.
  
     0.599
THII_3283
PDK repeat-containing protein.
  
     0.599
THII_2510
Membrane protease subunit, stomatin/prohibitin.
  
     0.563
THII_0756
Hypothetical protein.
  
     0.562
THII_2624
Filamentous hemagglutinin family domain-containing protein.
  
     0.549
THII_2387
Filamentous hemagglutinin family N-terminal domain.
  
     0.545
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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