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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_18104Fe-4S ferredoxin iron-sulfur binding domain-containing protein. (67 aa)    
Predicted Functional Partners:
THII_1811
NifY protein.
 
    0.828
THII_3129
Hypothetical protein.
  
    0.751
THII_1809
Nitrogen fixation protein NifT.
  
    0.697
THII_1817
Nitrogen fixation protein.
 
    0.684
THII_1812
Hypothetical protein.
       0.629
THII_1808
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.597
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
  
    0.584
THII_1807
Nitrogenase molybdenum-iron protein alpha chain.
 
    0.554
THII_1815
Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
    0.537
THII_0616
DsrC family protein; Part of a sulfur-relay system.
   
 
 0.524
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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