STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1812Hypothetical protein. (321 aa)    
Predicted Functional Partners:
THII_1810
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
       0.629
THII_1811
NifY protein.
       0.629
THII_1809
Nitrogen fixation protein NifT.
       0.551
THII_1815
Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
       0.424
THII_1816
Sigma factor RpoE regulatory protein RseC.
       0.424
THII_1817
Nitrogen fixation protein.
       0.424
THII_1813
Nitrogenase MoFe cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
       0.412
THII_1814
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; Belongs to the NifD/NifK/NifE/NifN family.
       0.412
THII_1808
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
       0.409
THII_1818
Ferredoxin.
       0.403
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.