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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1846Sodium/hydrogen exchanger family protein. (819 aa)    
Predicted Functional Partners:
THII_2996
WD repeat-containing protein.
  
 0.933
THII_0889
Hypothetical protein.
   
 0.911
THII_1630
GTP-binding protein.
   
 0.911
THII_1847
Signal transduction histidine kinase.
   
 
 0.804
THII_1820
Calmodulin.
   
 0.698
THII_3328
Putative signal transduction protein with EFhand domain.
   
 0.698
THII_2168
Signal transduction histidine kinase.
  
 
 0.675
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.629
THII_0636
Signal transduction histidine kinase.
  
 
 0.615
THII_1954
Signal transduction histidine kinase.
  
 
 0.607
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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