Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1846Sodium/hydrogen exchanger family protein. (819 aa)    
Predicted Functional Partners:
THII_2996
WD repeat-containing protein.
   
 0.980
THII_0889
Hypothetical protein.
    
 0.916
THII_1630
GTP-binding protein.
    
 0.916
THII_1820
Calmodulin.
    
 0.888
THII_3328
Putative signal transduction protein with EFhand domain.
    
 0.888
THII_1847
Signal transduction histidine kinase.
   
 
 0.790
THII_0386
Calcium-transporting ATPase 8, plasma membrane-type.
  
 
 0.699
THII_2136
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.673
THII_2168
Signal transduction histidine kinase.
  
 
 0.625
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
 
 0.619
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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