STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1867Tetratricopeptide repeat protein. (613 aa)    
Predicted Functional Partners:
THII_2996
WD repeat-containing protein.
   
 0.839
THII_1866
ABC-transporter protein.
 
     0.768
THII_1194
Hypothetical protein.
  
     0.680
THII_2379
Hypothetical protein.
  
     0.675
THII_1272
General secretory pathway protein K.
  
     0.669
THII_2639
Glycosyl transferase group 2 family protein.
  
 
 0.643
THII_0899
ATPase AAA.
  
     0.616
THII_0857
General secretion pathway protein H.
  
     0.580
THII_3847
ATPase.
  
     0.575
THII_0447
Hypothetical protein.
 
     0.558
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.