STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1879Hypothetical protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. (346 aa)    
Predicted Functional Partners:
THII_0535
Sigma-70 region 4 domain-containing protein.
  
    0.769
THII_0276
Clostripain.
  
     0.753
THII_0905
Subtilisin-like serine protease.
  
     0.732
THII_0879
ABC transporter ATP-binding protein.
  
     0.710
THII_3405
Hypothetical protein.
  
     0.666
THII_2906
Hypothetical protein.
  
     0.661
THII_1878
Surface antigen.
 
     0.648
THII_3698
Hypothetical protein.
  
     0.644
THII_3384
Mannonate dehydratase.
  
     0.642
THII_0899
ATPase AAA.
  
     0.615
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.