STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1898Glycine betaine/L-proline ABC transporter ATPase. (394 aa)    
Predicted Functional Partners:
THII_1897
Glycine betaine/proline transport system permease protein.
 0.999
THII_1896
Glycine betaine/proline transport system substrate-binding protein.
 0.998
THII_0588
Glycine betaine/proline transport system substrate-binding protein.
 
 0.985
THII_3114
Hypothetical protein.
 
      0.879
THII_0681
Binding-protein-dependent transporters inner membrane component.
 
      0.869
THII_1204
Molybdenum ABC transporter permease ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.828
THII_2603
Sulfate ABC transporter permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.802
THII_3567
ABC transporter.
 
     
0.615
THII_2604
Sulfate ABC transporter inner membrane subunit CysW.
 
      0.601
THII_1784
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
 
      0.560
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.