Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1914Deacetylase. (308 aa)    
Predicted Functional Partners:
THII_2023
ATPase AAA.
   
 0.826
THII_2996
WD repeat-containing protein.
    
 0.783
THII_0842
SNF2 family DNA/RNA helicase.
    
 0.708
THII_1915
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
  
 
 0.687
THII_1820
Calmodulin.
    
  0.665
THII_3328
Putative signal transduction protein with EFhand domain.
    
  0.665
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
    
 0.658
THII_1693
Ankyrin.
    
 0.655
THII_3678
Ankyrin.
    
 0.655
THII_1100
GCN5-related N-acetyltransferase.
 
     0.642
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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