Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_1925Chemotaxis protein CheW. (152 aa)    
Predicted Functional Partners:
cheB-2
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
 
 
 0.995
THII_1927
CheW-like protein.
 
  
 0.994
THII_1928
Response regulator receiver domain protein.
 
 0.994
THII_1924
Methyl-accepting chemotaxis protein.
 
 0.990
THII_1926
CheR-type MCP methyltransferase.
 
  
 0.951
THII_1283
Chemotaxis protein histidine kinase-like protein.
  
 
 0.863
THII_1988
Chemotaxis protein histidine kinase-like protein.
  
 
 0.863
THII_1930
Adenylate/guanylate cyclase.
 
  
 0.845
THII_2177
Chemotaxis protein histidine kinase CheA.
 
 
 0.824
THII_0554
CheA signal transduction histidine kinase.
 
 
 0.787
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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