STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1928Response regulator receiver domain protein. (929 aa)    
Predicted Functional Partners:
cheB-2
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
 
 0.998
THII_1927
CheW-like protein.
 0.997
THII_1925
Chemotaxis protein CheW.
 
 0.994
THII_1924
Methyl-accepting chemotaxis protein.
 
 0.991
THII_1926
CheR-type MCP methyltransferase.
  
 0.982
THII_2168
Signal transduction histidine kinase.
  
 
 0.967
THII_0636
Signal transduction histidine kinase.
  
 
 0.966
THII_1036
Signal transduction histidine kinase.
  
 
 0.950
THII_0331
PAS domain S-box.
  
 
 0.949
THII_2440
Multi-sensor hybrid histidine kinase.
  
 
 0.949
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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