STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1943Hydantoinase/oxoprolinase. (1349 aa)    
Predicted Functional Partners:
THII_1290
Glutamate--cysteine ligase GshA.
    
  0.901
THII_3728
Glutamate synthase.
    
 0.830
THII_0257
Glutamine synthetase, type I.
     
 0.800
THII_3058
Glutamate synthase.
     
  0.800
THII_1944
Hypothetical protein.
       0.570
THII_1941
Hypothetical protein.
       0.554
THII_1942
PilT protein domain-containing protein.
       0.554
THII_1025
Metallo-beta-lactamase family protein.
      
 0.487
THII_0839
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.458
THII_3532
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
     
 0.416
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.