STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1979Type IV fimbrial assembly protein pilC. (408 aa)    
Predicted Functional Partners:
THII_1980
Type IV prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.945
THII_1978
Type II secretory protein GspE.
 
 0.942
THII_2263
Type II secretion system protein E.
 
 0.891
THII_2977
Bacterial type II secretion system protein E.
 
 0.891
THII_0423
Secretion system protein E.
 
 0.890
THII_2520
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.889
THII_0660
Twitching motility protein PilT.
 
  
 0.793
THII_0658
Twitching motility protein.
  
   
 0.781
THII_0659
Twitching motility protein PilT.
  
   
 0.781
THII_1829
Pilus retraction protein PilT.
  
   
 0.781
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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