Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_1980Type IV prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (290 aa)    
Predicted Functional Partners:
THII_1979
Type IV fimbrial assembly protein pilC.
 
  
 0.945
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
  
 0.894
THII_1978
Type II secretory protein GspE.
 
 
 0.891
THII_0660
Twitching motility protein PilT.
 
   
 0.858
THII_2069
Bacterial type II secretion system protein.
 
  
 0.836
THII_0199
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.835
THII_2262
Type II secretory pathway, component PulF.
 
  
 0.828
THII_3300
General secretion pathway protein F.
 
  
 0.826
THII_3395
Type II secretion system protein.
 
  
 0.815
THII_2977
Bacterial type II secretion system protein E.
 
 
 0.814
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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