STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2054Large extracellular alpha-helical protein. (1953 aa)    
Predicted Functional Partners:
THII_3485
Glycosyl transferase.
 
   
 0.828
THII_2379
Hypothetical protein.
  
   
 0.690
THII_2048
Trypsin domain-containing lipoprotein.
   
 0.689
THII_1194
Hypothetical protein.
  
     0.687
THII_0899
ATPase AAA.
  
     0.669
THII_0441
Hypothetical protein.
  
    0.641
THII_2835
Hypothetical protein.
 
     0.617
THII_3335
Transmembrane protease serine 2.
    
 0.614
THII_3581
Trypsin domain-containing lipoprotein.
    
 0.614
trmJ
tRNA/rRNA methyltransferase, SpoU; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
       0.601
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.