STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2080TPR repeat containing protein. (666 aa)    
Predicted Functional Partners:
THII_2996
WD repeat-containing protein.
 
 
 0.885
THII_3786
Hypothetical protein.
  
 
   0.739
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
       0.737
THII_2639
Glycosyl transferase group 2 family protein.
  
 
 0.643
THII_1693
Ankyrin.
  
 0.546
THII_1820
Calmodulin.
  
 
  0.525
THII_3678
Ankyrin.
  
 0.517
THII_3486
Peptidase M1 family protein.
  
 
 0.505
THII_2297
Hypothetical protein.
 
   
 0.503
THII_1058
G-protein beta WD-40 repeat.
  
 
  0.500
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.