Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
THII_2089Family 3 adenylate cyclase. (615 aa)    
Predicted Functional Partners:
THII_2353
Transmembrane sensor domain-containing protein.
  
     0.771
THII_1632
Adenylyl cyclase class-3/4/guanylyl cyclase.
  
     0.770
THII_3141
Periplasmic ligand-binding sensor domain-containing protein.
  
     0.752
THII_3900
Beta-lactamase.
 
     0.693
THII_3571
Adenylate/guanylate cyclase.
  
     0.665
THII_2378
Cyclic nucleotide-binding protein.
  
   0.629
THII_2950
Cyclic nucleotide-binding protein.
  
   0.612
THII_2510
Membrane protease subunit, stomatin/prohibitin.
  
 
   0.488
THII_2968
PAS domain S-box.
  
 
   0.470
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.414
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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