STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2107Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (185 aa)    
Predicted Functional Partners:
THII_2106
Metal-dependent phosphohydrolase, HD subdomain.
       0.701
THII_2105
YCII-related domain protein.
       0.684
THII_2104
BolA-like protein; Belongs to the BolA/IbaG family.
  
    0.681
THII_2103
PpiC-type peptidyl-prolyl cis-trans isomerase.
       0.559
THII_2109
ABC transporter.
 
     0.535
THII_2108
Hypothetical protein.
       0.498
THII_3294
Hypothetical protein.
  
    0.497
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.
       0.490
THII_3062
Sensor kinase protein.
 
     0.469
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
     0.466
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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