STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2142Hypothetical protein. (72 aa)    
Predicted Functional Partners:
THII_2143
Hypothetical protein.
 
     0.948
THII_2141
UDP-galactopyranose mutase.
       0.773
THII_3636
Hypothetical protein.
 
     0.736
THII_2140
Hypothetical protein.
 
     0.680
THII_0897
Hypothetical protein.
  
     0.602
THII_3561
Hypothetical protein.
  
     0.467
THII_2131
Hypothetical protein.
  
     0.463
THII_2094
Hypothetical protein.
  
     0.439
THII_1125
Hypothetical protein.
  
     0.434
THII_0909
Hypothetical protein.
  
     0.431
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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