STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2178Fis family transcriptional regulator. (121 aa)    
Predicted Functional Partners:
THII_2177
Chemotaxis protein histidine kinase CheA.
 0.993
THII_2176
Chemotaxis protein CheW.
 
 
 0.972
THII_2175
Methyl-accepting chemotaxis protein.
 
 0.963
THII_0554
CheA signal transduction histidine kinase.
 0.937
THII_2446
Methyl-accepting chemotaxis protein.
 
 0.934
THII_0555
Response regulator receiver protein.
  
 
0.919
THII_3169
Methyl-accepting chemotaxis protein.
 
 0.918
THII_3210
Hypothetical protein.
 
  0.918
THII_0950
Methyl-accepting chemotaxis protein.
  
 0.916
THII_2447
Methyl-accepting chemotaxis protein.
  
 0.914
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.