Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
THII_2183Proteinase inhibitor I4, serpin; Belongs to the serpin family. (427 aa)    
Predicted Functional Partners:
THII_3486
Peptidase M1 family protein.
   
 0.645
THII_3581
Trypsin domain-containing lipoprotein.
 
 
 0.623
THII_3335
Transmembrane protease serine 2.
 
 
 0.616
THII_2048
Trypsin domain-containing lipoprotein.
 
 
 0.612
THII_3132
Hypothetical protein.
  
     0.585
THII_3651
Cysteine protease.
  
 
 0.528
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
       0.506
THII_0190
Apoptotic protease activating factor 1.
  
     0.493
THII_2498
Hypothetical protein.
  
     0.474
THII_2181
Hydrolase, TatD family.
       0.472
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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