Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
THII_0012 | THII_0837 | Polyketide synthase family protein. | acetoacetyl-CoA reductase. | 0.840 |
THII_0012 | THII_0839 | Polyketide synthase family protein. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.487 |
THII_0012 | THII_2201 | Polyketide synthase family protein. | FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
THII_0012 | THII_2204 | Polyketide synthase family protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.647 |
THII_0012 | THII_2205 | Polyketide synthase family protein. | Hypothetical protein. | 0.941 |
THII_0012 | THII_2206 | Polyketide synthase family protein. | acyl-CoA dehydrogenase. | 0.568 |
THII_0012 | THII_2207 | Polyketide synthase family protein. | Subfamily IIIC HAD-superfamily phosphatase. | 0.829 |
THII_0012 | THII_2220 | Polyketide synthase family protein. | Polyketide biosynthesis enoyl-CoA hydratase. | 0.757 |
THII_0837 | THII_0012 | acetoacetyl-CoA reductase. | Polyketide synthase family protein. | 0.840 |
THII_0837 | THII_0839 | acetoacetyl-CoA reductase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.955 |
THII_0837 | THII_2201 | acetoacetyl-CoA reductase. | FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.787 |
THII_0837 | THII_2204 | acetoacetyl-CoA reductase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.913 |
THII_0839 | THII_0012 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Polyketide synthase family protein. | 0.487 |
THII_0839 | THII_0837 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetoacetyl-CoA reductase. | 0.955 |
THII_0839 | THII_2201 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.978 |
THII_0839 | THII_2204 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.999 |
THII_0839 | THII_2206 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA dehydrogenase. | 0.991 |
THII_0839 | THII_2220 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Polyketide biosynthesis enoyl-CoA hydratase. | 0.974 |
THII_0839 | THII_3799 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Electron transfer flavoprotein alpha subunit. | 0.678 |
THII_0839 | THII_3800 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Electron transfer flavoprotein beta subunit. | 0.583 |
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