STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_22043-hydroxyacyl-CoA dehydrogenase. (284 aa)    
Predicted Functional Partners:
THII_0839
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
THII_2206
acyl-CoA dehydrogenase.
 
 0.990
THII_0837
acetoacetyl-CoA reductase.
 
 
 0.913
THII_2205
Hypothetical protein.
 
   
 0.872
THII_2207
Subfamily IIIC HAD-superfamily phosphatase.
 
   
 0.835
THII_2220
Polyketide biosynthesis enoyl-CoA hydratase.
 
 
 0.826
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.800
THII_3800
Electron transfer flavoprotein beta subunit.
 
 
 0.707
THII_3799
Electron transfer flavoprotein alpha subunit.
 
 
 0.668
THII_0012
Polyketide synthase family protein.
 
  
 0.647
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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