Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_2219Polyketide biosynthesis protein pksG. (419 aa)    
Predicted Functional Partners:
THII_0839
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.977
THII_2208
Polyketide synthase.
 
 0.960
THII_2220
Polyketide biosynthesis enoyl-CoA hydratase.
 
 
 0.957
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.953
THII_2215
Malonyl CoA-ACP transacylase.
 
  
 0.939
THII_2202
Polyketide synthase.
 
  
 0.794
THII_2209
Polyketide synthase.
  
     0.770
THII_0012
Polyketide synthase family protein.
 
  
 0.695
THII_0242
Diacylglycerol kinase, catalytic region.
    
 
 0.617
THII_3156
Squalene/phytoene synthase.
   
 
 0.615
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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