Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_2277Heterodisulfide reductase subunit A. (424 aa)    
Predicted Functional Partners:
THII_2278
Heterodisulfide reductase subunit A.
 
 
0.990
THII_2280
Heterodisulfide reductase subunit B.
 
 
 0.977
THII_2279
Heterodisulfide reductase subunit C.
 
 
 0.960
THII_2508
Heterodisulfide reductase subunit B.
 
 
 0.931
THII_3690
NADPH-dependent glutamate synthase beta chain - like protein.
    
 0.895
THII_3058
Glutamate synthase.
 
      0.829
THII_3105
Dissimilatory adenylylsulfate reductase beta subunit.
 
   
 0.794
THII_3106
Dissimilatory adenylylsulfate reductase alpha subunit precursor.
  
  
 0.774
THII_0833
Hypothetical protein.
  
     0.771
THII_1522
NAD-reducing hydrogenase hoxS subunit delta.
  
 
 0.690
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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