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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2300Group 1 glycosyl transferase. (364 aa)    
Predicted Functional Partners:
THII_0760
Glycosyltransferase, group 2 family protein.
 
  
 0.701
THII_1708
Glycosyl transferase.
  
     0.645
THII_0054
Nucleoside-diphosphate-sugar epimerase.
  
    0.637
THII_2301
Glycosyltransferase.
 
    0.623
THII_0737
dTDP-glucose 4,6-dehydratase.
  
    0.614
THII_2303
Asparagine synthase, glutamine-hydrolyzing.
 
    0.566
glgB
1,4-alpha-glucan-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.546
THII_2507
NAD-dependent epimerase/dehydratase.
  
    0.514
THII_0738
Group 2 glycosyl transferase.
  
    0.506
THII_2208
Polyketide synthase.
  
 
 0.502
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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