STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2321Hypothetical protein. (255 aa)    
Predicted Functional Partners:
THII_2320
Sulfite oxidase.
 
   
 0.952
THII_2319
Hypothetical protein.
  
    0.636
THII_0535
Sigma-70 region 4 domain-containing protein.
  
     0.554
THII_0276
Clostripain.
  
     0.542
THII_3651
Cysteine protease.
  
     0.537
THII_2322
Hypothetical protein.
       0.520
THII_3698
Hypothetical protein.
  
     0.510
THII_2291
Para-aminobenzoate synthase component I.
  
     0.489
THII_2054
Large extracellular alpha-helical protein.
  
     0.481
THII_1879
Hypothetical protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.466
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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