STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_2340Rubredoxin. (59 aa)    
Predicted Functional Partners:
THII_3133
Nitric oxide reductase; Belongs to the FAD-dependent oxidoreductase family.
 
 
 0.917
THII_1782
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.860
THII_0066
Hypothetical protein.
  
  
 0.735
THII_2341
Phosphomethylpyrimidine kinase.
  
    0.626
thiE
Thiamine monophosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
    0.614
THII_3128
Flavodoxin/nitric oxide synthase.
 
  
 0.567
THII_3303
Antioxidant, AhpC/Tsa family protein.
  
  
 0.529
THII_2459
Hydrogenase (NiFe) small subunit HydA.
  
 
 0.482
THII_2462
Hydrogenase (NiFe) small subunit HydA.
  
 
 0.482
THII_3836
Ferritin-like domain containing protein; Iron-storage protein.
  
  
 0.459
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.