Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_2367Mannose-1-phosphate guanylyltransferase. (222 aa)    
Predicted Functional Partners:
THII_2366
Aminoglycoside phosphotransferase.
 
 0.999
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
     
 0.900
murB-2
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.900
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.814
THII_1345
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.717
THII_0760
Glycosyltransferase, group 2 family protein.
 
 
 0.646
THII_3057
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.570
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.491
THII_2208
Polyketide synthase.
  
 
 0.486
THII_1273
RmlD substrate binding domain; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.473
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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